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Detecting low-level mutations by utilizing the re-sequencing error profile of the data

You can download file releases of Dreep project from List of release files

List of release files

File/Folder NameFile TypeSizeDateDownload Count
Latest 5 files
readme.txttext/plain; charset=us-ascii0.8 KB2012-09-17 11:430
sam_to_pileup.pytext/x-java; charset=us-ascii7.8 KB2012-09-17 11:330
Pois_emp_overlap.pltext/x-perl; charset=us-ascii1.3 KB2012-09-17 11:330
filter_and_summary.pltext/x-perl; charset=utf-89.1 KB2012-09-17 11:330
error_profile_emp.pltext/x-perl; charset=us-ascii6.8 KB2012-09-17 11:330
All Files
DREEP
0.7
readme.txttext/plain; charset=us-ascii0.8 KB2012-09-17 11:430
sam_to_pileup.pytext/x-java; charset=us-ascii7.8 KB2012-09-17 11:330
Pois_emp_overlap.pltext/x-perl; charset=us-ascii1.3 KB2012-09-17 11:330
filter_and_summary.pltext/x-perl; charset=utf-89.1 KB2012-09-17 11:330
error_profile_emp.pltext/x-perl; charset=us-ascii6.8 KB2012-09-17 11:330
error_profile_pois.pltext/x-perl; charset=us-ascii4.9 KB2012-09-17 11:330
Dreep_result_filter_indel.pltext/x-perl; charset=us-ascii4.0 KB2012-09-17 11:330
Dreep_result_filter.pltext/x-perl; charset=us-ascii4.3 KB2012-09-17 11:330
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-09-17 11:330
Dreep_fisher.pltext/plain; charset=us-ascii8.4 KB2012-09-17 11:330
Dreep_emp.pltext/x-perl; charset=us-ascii5.8 KB2012-09-17 11:330
0.6
sam_to_pileup.pytext/x-java; charset=us-ascii7.8 KB2012-06-07 16:120
filter_and_summary.pltext/x-perl; charset=utf-89.0 KB2012-06-07 16:120
readme.txttext/plain; charset=us-ascii0.4 KB2012-06-07 16:121
error_profile_pois.pltext/x-perl; charset=us-ascii4.9 KB2012-06-07 16:120
error_profile_emp.pltext/x-perl; charset=us-ascii6.7 KB2012-06-07 16:120
Dreep_result_filter.pltext/x-perl; charset=us-ascii4.2 KB2012-06-07 16:120
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-06-07 16:120
Dreep_fisher.pltext/plain; charset=us-ascii8.4 KB2012-06-07 16:120
Dreep_emp.pltext/x-perl; charset=us-ascii5.7 KB2012-06-07 16:120
0.5
readme.txttext/plain; charset=us-ascii0.4 KB2012-05-30 11:230
sam_to_pileup.pytext/x-java; charset=us-ascii7.8 KB2012-05-30 11:140
filter_and_summary.pltext/x-perl; charset=utf-88.5 KB2012-05-30 11:140
error_profile_emp.pltext/x-perl; charset=us-ascii6.5 KB2012-05-30 11:140
error_profile_pois.pltext/x-perl; charset=us-ascii4.6 KB2012-05-30 11:140
Dreep_result_filter.pltext/x-perl; charset=us-ascii4.2 KB2012-05-30 11:140
Dreep_fisher.pltext/plain; charset=us-ascii8.3 KB2012-05-30 11:140
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-05-30 11:140
Dreep_emp.pltext/x-perl; charset=us-ascii5.7 KB2012-05-30 11:140
0.4
filter_and_summary.pltext/x-perl; charset=utf-88.5 KB2012-05-07 18:410
error_profile_emp.pltext/x-perl; charset=us-ascii6.5 KB2012-05-07 18:410
error_profile_pois.pltext/x-perl; charset=us-ascii4.6 KB2012-05-07 18:410
Dreep_fisher.pltext/plain; charset=us-ascii8.3 KB2012-05-07 18:410
Dreep_emp.pltext/x-perl; charset=us-ascii5.7 KB2012-05-07 18:410
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-05-07 18:410
Dreep_result_filter.pltext/x-perl; charset=us-ascii3.1 KB2012-05-07 18:410
Haplogroup assignment
input_mtDNAble.pltext/x-perl; charset=us-ascii7.2 KB2012-04-24 13:440
mt_anno.pltext/x-perl; charset=us-ascii1.4 KB2012-04-24 13:430
maln_hetero.pmtext/plain; charset=us-ascii10.4 KB2012-04-17 18:170
aln_cb.pmtext/plain; charset=us-ascii22.8 KB2012-04-17 18:170
maln.pmtext/plain; charset=us-ascii15.2 KB2012-04-17 18:171
human NUMTs database
Supplementary_table_1_2_3_4_r1.xlsapplication/vnd.ms-office; charset=binary2.3 MB2012-04-13 16:460
NUMTs.READMEtext/plain; charset=us-ascii0.8 KB2012-04-11 18:240
blast_numts_summary.pltext/plain; charset=us-ascii2.0 KB2012-04-11 18:220
blast_result.pltext/plain; charset=us-ascii3.0 KB2012-04-11 17:440
polymorphism_numt.csvtext/plain; charset=us-ascii41.8 KB2012-04-11 17:440
position_influenced_by_numt.csvtext/plain; charset=us-ascii1.1 MB2012-04-11 17:390
NUMTs.list.csvtext/plain; charset=us-ascii281.9 KB2012-04-11 17:040
Dreep_emp.pltext/x-perl; charset=us-ascii5.4 KB2012-04-11 16:180
error_profile_emp.pltext/x-perl; charset=us-ascii6.5 KB2012-04-11 16:180
v0.3
Dreep_result_filter_v2.pltext/x-perl; charset=us-ascii3.1 KB2012-04-11 16:170
Dreep_fisher.pltext/plain; charset=us-ascii6.7 KB2012-04-04 18:190
error_profile_pois.pltext/x-perl; charset=us-ascii4.6 KB2012-04-04 18:190
filter_and_summary.pltext/x-perl; charset=utf-88.5 KB2012-04-04 18:190
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-04-04 18:190
Dreep_result_filter_v2.pltext/x-perl; charset=us-ascii3.1 KB2012-04-04 18:180
v0.2
Dreep_poisson.pltext/plain; charset=us-ascii9.2 KB2012-02-10 17:130
READMEtext/plain; charset=us-ascii0.6 KB2012-01-23 14:510
error_profile_pois.pltext/x-perl; charset=us-ascii4.6 KB2012-01-23 14:410
filter_and_summary.pltext/x-perl; charset=utf-88.5 KB2012-01-23 14:410
error_profile_emp.pltext/x-perl; charset=us-ascii6.5 KB2012-01-23 14:340
Dreep_emp.pltext/x-perl; charset=us-ascii5.4 KB2012-01-23 14:340
Dreep_result_filter.pltext/x-perl; charset=us-ascii2.4 KB2012-01-23 14:340
v0.1
Dreep_fisher.pltext/plain; charset=us-ascii6.7 KB2011-11-08 14:290
Dreep_emp.pltext/x-perl; charset=us-ascii4.3 KB2011-11-08 14:290
error_profile.pltext/x-perl; charset=us-ascii4.6 KB2011-11-08 14:290
Dreep_poisson.pltext/plain; charset=us-ascii8.1 KB2011-11-08 14:290
filter_and_summary.pltext/x-perl; charset=utf-88.6 KB2011-11-08 14:290


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