Develop and Download Open Source Software

contra-cnv

[RSS]Download

Would you recoomend this project?

Copy Number Analysis for Targeted Resequencing (CONTRA) is a tool for copy number variation (CNV) detection for targeted resequencing data such as those from whole-exome capture data.

You can download file releases of contra-cnv project from List of release files

System Requirements

Operating System: MacOSX, Linux
CONTRA.v2.0.3.tar.gz
Date: 2012-07-24, Size: 3117084
CONTRA.v2.0.3.tar.gz
Date: 2012-07-24, Size: 3117084
CONTRA.v2.0.3.tar.gz
Date: 2012-07-24, Size: 3117084
CONTRA.v2.0.3.tar.gz
Date: 2012-07-24, Size: 3117084
CONTRA.v2.0.3.tar.gz
Date: 2012-07-24, Size: 3117084

List of release files

File/Folder NameFile TypeSizeDateDownload Count
Latest 5 files
README.txttext/plain; charset=us-ascii0.1 KB2012-07-24 04:491
CONTRA.v2.0.3.tar.gzapplication/x-gzip; charset=binary3.0 MB2012-07-24 04:445
P0667N_GATKrealigned_duplicates_marked.bamapplication/x-gzip; charset=binary553.2 MB2012-05-30 06:383
P0667T_GATKrealigned_duplicates_marked.bamapplication/x-gzip; charset=binary523.0 MB2012-05-30 06:253
README.txttext/plain; charset=us-ascii2.5 KB2012-05-30 03:431
All Files
CONTRA.V2.0
README.txttext/plain; charset=us-ascii0.1 KB2012-07-24 04:491
CONTRA.v2.0.3.tar.gzapplication/x-gzip; charset=binary3.0 MB2012-07-24 04:445
CONTRA.v2.0.2.tar.gzapplication/x-gzip; charset=binary3.1 MB2012-01-31 06:364
CONTRA.v2.0.1.tar.gzapplication/x-gzip; charset=binary3.0 MB2011-10-31 05:504
CONTRA.v2.0.tar.gzapplication/x-gzip; charset=binary3.0 MB2011-10-17 07:030
Test files
P0667N_GATKrealigned_duplicates_marked.bamapplication/x-gzip; charset=binary553.2 MB2012-05-30 06:383
P0667T_GATKrealigned_duplicates_marked.bamapplication/x-gzip; charset=binary523.0 MB2012-05-30 06:253
README.txttext/plain; charset=us-ascii2.5 KB2012-05-30 03:431
P0667T_GATKrealigned_duplicates_marked.bam.baiapplication/octet-stream; charset=binary5.5 MB2012-05-30 03:430
P0667N_GATKrealigned_duplicates_marked.bam.baiapplication/octet-stream; charset=binary5.7 MB2012-05-30 03:410
0247401_D_BED_20090724_hg19_MERGED.bedtext/plain; charset=us-ascii245.1 KB2012-05-30 03:404
Baselines
hapmap_ECU_6samples.baseline.tarapplication/x-gzip; charset=binary438.9 MB2011-12-28 05:112
NimbleGen_EzExomeV2.baseline.tar.gzapplication/x-gzip; charset=binary816.3 MB2011-10-12 05:301
Agilent_SureSelect_Mouse_AllExon.tar.gzapplication/x-gzip; charset=binary587.3 MB2011-10-12 05:130
NimbleGen_SeqCap_Exome_Array.tar.gzapplication/x-gzip; charset=binary295.1 MB2011-10-05 08:150
Agilent_SureSelect_V2.baseline.tar.gzapplication/x-gzip; charset=binary528.0 MB2011-10-05 07:501
NimbleGen_EzExomeV1.baseline.tar.gzapplication/x-gzip; charset=binary306.3 MB2011-10-05 07:401
Agilent_SureSelect_All_Exon_50Mb_ICGC.baseline.tar.gzapplication/x-gzip; charset=binary497.0 MB2011-10-05 07:101
User Manual
CONTRA_User_Guide.2.0.pdfapplication/pdf; charset=binary148.8 KB2011-10-17 07:031
CONTRA_User_Guide.1.0.3.pdfapplication/pdf; charset=binary596.0 KB2011-05-11 14:581
CONTRA.V1.0
CONTRA.v1.0.3.tar.gzapplication/x-gzip; charset=binary3.0 MB2011-05-10 01:130
CONTRA.v1.0.2.tar.gzapplication/x-gzip; charset=binary3.0 MB2011-04-05 05:030
CONTRA.v1.0.1.tar.gzapplication/x-gzip; charset=binary3.0 MB2011-04-04 04:410
CONTRA.v1.0.tar.gzapplication/x-gzip; charset=binary3.3 MB2011-04-01 02:090


SourceForge.JP is a Japanese version of SourceForge.net. For developments that are not related to Japan, we recommend you to use SourceForge.net.